Alternatives to Clarity LIMS

14,000 laboratories. 125 countries 98% customer satisfaction! LabWare's range of laboratory automation solutions can help you increase productivity, throughput and efficiency, as well as data integrity and compliance. LabWare offers flexible deployment options. Laboratories that are looking to deploy in a matter of days can choose the fully-validated and cost-optimized SaaS LIMS with best practice workflows. Laboratories who require a fully customizable enterprise-level LIMS/ELN for their business can choose from either self-hosted or flexible cloud deployment options. LabWare users have access to world-class features like lot management, sample and stability management, instrument interfacing and workflows and dashboards, inventory and COA management, COAs, barcoding and many more.

A cloud LIMS that tracks samples, tests results, and manages inventory for life science research, industrial QC labs, and biotech/NGS. Includes regulatory support for CLIA and HIPAA, Part 11 and ISO 17025. The quality, security, traceability, and traceability for samples is crucial to a lab's success. Laboratory professionals can use the Lockbox LIMS system to manage their samples. They have full visibility of every step of the sample's journey from accession to long-term storage. LIMS analysis is more than just tracking results. Lockbox's multilayered sample storage and location management functionality lets you define your lab's storage structure using a variety location options: rooms and storage units, shelves and racks, boxes and boxes.

QBench allows you to keep track of all your samples and where they are located in the workflow using a single system. QBench eliminates the need for spreadsheets, shared folders in the network, and paper-based tracking systems. You can view hundreds of PDF reports/COAs before publishing or emailing. You can generate barcodes and create labels that you can customize for your samples. Compatible with standard printers and scanners. QBench's billing module allows you to create and send invoices right from the system. You can see counts and latencies for different data types in QBench. This includes metrics like turnaround time, sample counts per test, sample delay, and many others. QBench makes it easy for you to gather the data your lab needs for the assays you perform.

The AQ Manager LIMS Full Web leverages cutting-edge technology like .Net to provide a solution tailored to meet the needs of IT administrators effectively. Its deployment is straightforward and rapid, whether on your own Windows servers or ours, requiring only a standard web browser such as Internet Explorer, Firefox, or Chrome. Thanks to its web-based design, our application is accessible across various devices including PCs, Macs, tablets, and smartphones. Furthermore, it supports a wide range of databases, including MySQL and MS SQL Server. LIMS encompasses all the necessary features for the comprehensive management of laboratories focused on analysis and quality control. Its unique functionalities set it apart in the competitive landscape of LIMS solutions. Designed with user-friendliness in mind, its interface has been refined through ongoing collaboration with our clients, ensuring it remains a top priority in our development efforts. Additionally, the graphic interface allows for a seamless navigation experience, making it both intuitive and fully customizable to suit individual user preferences. This adaptability enhances user satisfaction and efficiency, making LIMS a valuable asset for any laboratory setting.

Compliance Builder™, a real-time monitoring tool, is designed to enable 21 CFR Part 11 compliance. It provides data integrity across IT systems such file systems, laboratory and manufacturing instruments, as well as providing file system, database, laboratory, and manufacturing instrument data integrity. Compliance Builder allows you secure track all IT subsystems, including file systems, databases and laboratory equipment. It can be set up to monitor any file-based system, including file modifications and additions.

The award-winning XIFIN LIS stands out as a fully scalable SaaS laboratory information system that supports multi-specialty workflows, offers an extensive array of tools, and ensures flexible and secure connectivity, all while providing advanced features that enhance the efficiency of high-volume and intricate testing laboratories. As the healthcare sector transitions towards value-based and patient-centered care models, this shift is being hastened by the rapid increase in the use of genomic testing and personalized medicine enabled by next-generation sequencing (NGS). Laboratories are required to modify their current workflows to effectively handle the implementation and reporting of these complex tests. Given that diagnostic insights can lower overall healthcare expenditures and elevate the quality of patient care, it becomes essential for laboratories to integrate more effectively with the broader healthcare ecosystem. This evolution in healthcare demands enhanced collaboration and communication among all diagnostic and healthcare providers to meet the increasing complexities of patient care. Furthermore, embracing these changes is vital for laboratories to maintain their relevance and to continue delivering high-quality services in a rapidly evolving landscape.

Azenta Life Sciences delivers versatile, robust, and scalable informatics solutions for sample processing, allowing laboratories to effectively implement systems across various locations while leveraging integrated project and diagnostic management capabilities. Our unmatched sample exploration and management tools are designed to expedite your processes in discovery, development, and delivery. Additionally, Azenta Life Sciences provides cloud-driven informatics solutions that streamline laboratory workflows and enhance staff efficiency through standardized procedures. The software encompasses various modules that oversee clinical trials, patients and families, informed consent, storage, diagnostics, next-generation sequencing, and sample handling. It also features connectivity with external data sources and offers adaptable options for incorporating third-party systems and instruments, ensuring a comprehensive approach to laboratory management. This enables laboratories to maintain a high level of accuracy and efficiency in their operations.

KareXpert LIMS (Laboratory Information Management System), is a software program that manages, stores, and analyzes data generated in a laboratory. It aids laboratory personnel in streamlining processes, increasing efficiency, and ensuring data accuracy. LIMS functions include sample collection and dispatch, sample acknowledge, sample acknowledge, outsourced sample management, sample processing, and sample acknowledgment. It can be used in conjunction with other laboratory equipment to automate data transfer and reduce potential errors. KareXpert LIMS provides secure access controls and data tracking to improve data security and regulatory compliance.

By utilizing Lenava LIMS software in your laboratory, every single aspect of your operations remains meticulously managed. It offers an all-encompassing and unified perspective on samples, tests, and workflows, ensuring nothing is overlooked. Furthermore, it allows for real-time monitoring of modifications throughout the sample's lifecycle and keeps an extensive log of every action taken on it. Key features include tracking sample locations, managing inventories of reagents and consumables, integrating instruments, and facilitating the development and enhancement of workflows. Its high configurability and modularity, paired with robust report generation capabilities, empower your laboratory to exceed customer expectations. With our solution, you can actively manage sample accessioning and data handling as fundamental components of your laboratory's software suite. Additionally, you can introduce automation and streamline your processes, transforming any scientific workflow into a series of manageable and trackable steps. This ensures that your laboratory operates efficiently and effectively, consistently delivering outstanding results.

OpenFreezer is an open-source information management platform aimed at biological laboratories, designed to streamline reagent tracking and workflow management. This system meticulously records details about each reagent used in the lab, including unique properties like sequences and external identifiers, as well as information on their physical preparations, such as storage locations and characteristics. In addition to serving as a comprehensive repository for reagent data, OpenFreezer also features workflow tools that assist with tasks like primer design and automated feature mapping, making it an essential resource for bench scientists. It offers a suite of software tools tailored to meet the needs of wetlab scientists, enhancing their efficiency and productivity. At its foundation, OpenFreezer focuses on tracking various types of reagents, their specific properties, all isolates and preparations, and the precise storage arrangements within the laboratory for each reagent prep. This holistic approach to reagent management and workflow optimization positions OpenFreezer as a crucial asset for any biological research facility.

Manage, store, and collaborate on multi-omic datasets effectively. The Illumina Connected Analytics platform serves as a secure environment for genomic data, facilitating the operationalization of informatics and the extraction of scientific insights. Users can effortlessly import, construct, and modify workflows utilizing tools such as CWL and Nextflow. The platform also incorporates DRAGEN bioinformatics pipelines for enhanced data processing. Securely organize your data within a protected workspace, enabling global sharing that adheres to compliance standards. Retain your data within your own cloud infrastructure while leveraging our robust platform. Utilize a versatile analysis environment, featuring JupyterLab Notebooks, to visualize and interpret your data. Aggregate, query, and analyze both sample and population data through a scalable data warehouse, which can adapt to your growing needs. Enhance your analysis operations by constructing, validating, automating, and deploying informatics pipelines with ease. This efficiency can significantly decrease the time needed for genomic data analysis, which is vital when rapid results are essential. Furthermore, the platform supports comprehensive profiling to uncover novel drug targets and identify biomarkers for drug response. Lastly, seamlessly integrate data from Illumina sequencing systems for a streamlined workflow experience.

Agilent SLIMS takes charge of every aspect of your laboratory, from initial sample receipt to the generation of automated reports. By integrating the functionalities of a laboratory information management system (LIMS) and an electronic laboratory notebook (ELN), SLIMS offers comprehensive solutions that help you effectively oversee the entirety of your lab's content and context. Regardless of the intricacies of your laboratory environment, SLIMS is designed to meet your specific requirements. Its user-friendly interface allows you to monitor assets efficiently, swiftly rectify issues, and optimize your workflows. Additionally, the system can be quickly set up, which minimizes the time and effort required for implementation. Our team of SLIMS engineers possesses extensive expertise in laboratory informatics and scientific processes. They are well-versed in your domain and are committed to supporting you through various project phases, including installation, validation, and customization of the software, ensuring that it is tailored to your unique operational needs. With their assistance, you can maximize the effectiveness and efficiency of your laboratory operations.

Laboratory ERP software provides a means to efficiently oversee samples and their related data. Implementing an ERP system enables your laboratory to automate various processes, connect different instruments, and handle samples along with their pertinent information. Moreover, it facilitates faster generation of dependable results, while also allowing for the monitoring of data from sequencing activities over time and through multiple experiments, ultimately enhancing overall productivity. This comprehensive approach not only streamlines operations but also supports continuous improvement in lab performance and data accuracy.

It adeptly oversees the movement of samples and their related data, enhancing laboratory productivity while aiding in the standardization of workflows, tests, and procedures, all while ensuring precise control over the entire process. Effective management of samples is crucial for preserving their integrity, maintaining data quality, and ensuring a reliable chain of custody. Key aspects of sample management include overseeing shipments, managing accessioning, and maintaining inventory levels. Additionally, it is essential to monitor laboratory instruments, schedule tasks, and perform maintenance as needed. Efficient management of storage space and freezers across various facilities is vital to uphold the required environmental conditions for solutions, reagents, and samples, ensuring they are kept in optimal states. Functions related to inventory and storage management keep track of the location of items and their duration of storage. LIMS software efficiently handles stock supplies and reagents, providing automatic reorder notifications to avoid shortages. Furthermore, comprehending the overhead and capacity your team can accommodate is critical for establishing realistic timelines for project completion. This comprehensive approach not only streamlines operations but also enhances overall laboratory performance.

Element LIMS stands as a versatile commercial off-the-shelf (COTS) laboratory information management system designed for laboratories engaged in testing various substances, including water, soil, air, food, and cannabis. Enhance productivity and ensure adherence to regulations through user-friendly workflows, advanced analytical features, and robust data handling capabilities. By simplifying login processes, fortifying lab analyses, automating report generation, expediting instrument data uploads, and incorporating quality control measures, this system effectively meets diverse laboratory needs. Each day, numerous users across commercial, private, federal, state, and local government labs reap the benefits of Element LIMS's extensive functionality. Tailored specifically for environmental testing laboratories, the system offers features that cater to the unique demands of soil, water, air, cannabis, and food residue analysis. Furthermore, it optimizes project management by providing project templates and facilitating the automated transformation of bids, thereby enhancing efficiency. With automated bench sheets, seamless instrument integration, and the ability to process samples in batches, Element LIMS significantly simplifies sample management for laboratories. This comprehensive approach not only boosts overall operational efficiency but also empowers labs to focus more on their core testing objectives.

Efficient data management and streamlined bioinformatics solutions are essential for laboratories that are either just beginning or rapidly expanding their next-generation sequencing (NGS) capabilities. As an integral part of the BaseSpace Suite, BaseSpace Sequence Hub serves as a seamless extension to your Illumina instruments. The encrypted data transmission from these instruments into BaseSpace Sequence Hub simplifies the management and analysis of your data through a selection of specialized analysis applications. Built on the robust Amazon Web Services (AWS), BaseSpace Sequence Hub prioritizes security, ensuring a safe environment for your data. It allows users to initiate sequencing runs and monitor the quality of instrument operations effectively. This system enhances productivity by converting sequencing data into a standardized format and facilitating direct cloud streaming. Additionally, it grants access to necessary computational resources without the need for significant investments in on-premises infrastructure. Ultimately, it boosts organizational efficiency by providing easy access to a wide array of genomic analysis applications, whether developed by you, Illumina, or third-party providers, thus fostering innovation and progress in genomic research.

A comprehensive Resource Management, Business Process, and Workflow Management System designed for laboratories specializing in testing food, air, water, wastewater, sludge, soil, and noise. This Laboratory Information Management System (LIMS) is ideal for environmental testing, research institutions, and quality control labs. KRITI LIMS offers a fully web-based and highly adaptable solution tailored for testing laboratories. It oversees the complete automation of business processes and workflows within these labs. This solution efficiently manages a range of testing activities, including sample booking, tracking, quality control, research and development, test report generation, billing, accounting, and business intelligence modules. Additionally, cloud-based options are available to accommodate multiple laboratories and institutions seamlessly. Say goodbye to tedious and prolonged implementation timelines; you can configure and start running your lab in just seven working days. With KRITI LIMS, efficiency and flexibility are at your fingertips, ensuring that your lab operates smoothly and effectively.

Emedgene optimizes the workflows involved in tertiary analysis for rare disease genomics and various germline research endeavors. It is specifically built to enhance the speed and reliability of interpreting, prioritizing, curating, and generating research reports for user-defined variants. By incorporating explainable AI (XAI) and automation, Emedgene boosts efficiency across diverse analysis workflows, including genomes, exomes, virtual panels, and targeted panels. The platform facilitates the integration of laboratory processes and NGS instruments with IT systems, streamlining and securing the entire workflow. With continuous advancements in science, technology, and demand, Emedgene empowers users to stay current by offering cutting-edge knowledge graph features, curation tools, and expert support throughout their research journey. Furthermore, it allows laboratories to increase their throughput without the need for additional personnel, thanks to XAI and automated processes. Ultimately, Emedgene enables the deployment of high-throughput workflows for whole genome sequencing (WGS), whole exome sequencing (WES), virtual panels, or targeted panels that seamlessly fit into the digital framework of any lab. This comprehensive approach ensures that researchers can focus on their discoveries while relying on robust technological support.

Combinatorial barcoding technology revolutionizes the outdated limitations of traditional single-cell methodologies. By eliminating the need for specialized instruments, it empowers researchers to make groundbreaking discoveries with ease. This innovation allows for the profiling of anywhere from 1,000 to 1 million cells or nuclei in a single experiment, driving forward unparalleled advancements in science. Evercode combinatorial barcoding technology significantly outperforms droplet-based methods, enabling researchers to increase the scale of their experiments without the constraints of previous technologies. Enjoy enhanced data quality while avoiding the complexities and requirements of outdated hardware. Conduct single-cell experiments using only a pipette and standard laboratory tools, simplifying the process and making it more accessible. The split-pool combinatorial barcoding technique facilitates scalable single-cell analysis without relying on any specialized instruments, making it easier than ever to achieve scalable sequencing. Each kit includes a comprehensive set of reagents and user-friendly analysis software, streamlining the entire workflow from start to finish for optimal efficiency. This technology not only enhances research capabilities but also fosters a new era of accessibility in scientific exploration.

MocDoc LIMS is a comprehensive, scalable lab management system that empowers laboratories to streamline workflows, improve data accuracy, and ensure regulatory compliance. With automated sample management, real-time tracking, integration with lab instruments, and flexible reporting capabilities, MocDoc LIMS improves operational efficiency while maintaining patient confidentiality. By reducing manual errors and enhancing communication across departments, MocDoc accelerates result turnaround times and enhances decision-making for healthcare providers.

The Illumina DRAGEN Secondary Analysis system offers precise, thorough, and highly efficient processing of next-generation sequencing data. Utilizing a graph reference genome alongside machine learning techniques, it achieves remarkable accuracy. The workflow is exceptionally streamlined, capable of completely analyzing a 34x whole human genome in approximately 30 minutes when using the DRAGEN server v4. Additionally, it enhances this workflow by compressing FASTQ file sizes by up to five times. This system is adept at analyzing a variety of NGS data types, including whole genomes, exomes, methylomes, and transcriptomes. It is designed to be compatible with the user's preferred platform and is scalable to meet varying requirements. DRAGEN analysis consistently ranks as a leader in accuracy for both germline and somatic variant detection, as evidenced by its performance in industry competitions conducted by precisionFDA. This advanced analysis solution empowers laboratories of all sizes and specialties to maximize the potential of their genomic datasets. Moreover, the implementation of highly adaptable field-programmable gate array (FPGA) technology allows DRAGEN to deliver hardware-accelerated genomic analysis algorithms, further enhancing its performance. Such advancements position DRAGEN as a vital tool in the ever-evolving field of genomics.

To expedite innovative breakthroughs and swiftly bring products to market, research and development alongside manufacturing facilities must adapt and modify their processes in real time. Data management should never become a hindrance in this dynamic landscape. The Thermo Scientific™ Nautilus LIMS™ for Dynamic Discovery and R&D Environments, co-developed with clients operating in rapid R&D contexts, offers a highly adaptable and user-friendly system that enhances workflow efficiency, increases throughput, and ensures data accuracy while streamlining administrative tasks, sample tracking, and adherence to regulatory standards. Its automated management of intricate boards and specialized graphics tools simplifies data oversight, allowing even less experienced users to easily identify and monitor processes. Clients are empowered to design workflows, track the life cycles of samples, and automate interactions across various platforms while seamlessly incorporating regulated protocols that conform to good laboratory practices and the 21 CFR Part 11 regulations. This innovative approach not only fosters a more efficient research environment but also encourages collaboration and creativity among teams.

Confience eLIMS is an advanced Laboratory Information Management System (LIMS) that simplifies lab operations across industries like water, food, manufacturing, and automotive. This all-in-one software helps labs manage samples, automate workflows, and ensure data accuracy while staying compliant with standards like FDA 21 CFR Part 11, ISO 17025, and GLP/GMP. By optimizing processes from sample collection to reporting, Confience eLIMS ensures labs meet regulations and deliver top-quality results. Key features of eLIMS include intuitive dashboards that provide real-time insights into laboratory operations, enabling users to monitor performance metrics and make informed decisions. The software also offers seamless integrations with existing laboratory instruments and systems, allowing for a cohesive workflow that minimizes manual data entry and reduces the risk of errors. Confience eLIMS stands out by automating routine tasks and offering a central platform for data management, allowing labs to enhance analytical capabilities and improve turnaround times. Additionally, eLIMS includes powerful reporting tools that enable laboratories to generate comprehensive reports effortlessly, supporting data analysis and compliance documentation. One of the standout benefits of eLIMS is its ability to drive continuous improvement within laboratory environments. By automating routine tasks and providing a centralized platform for data management, laboratories can focus on enhancing their analytical capabilities and improving turnaround times. This not only leads to faster results but also fosters a culture of quality and accountability, which is essential in today’s competitive landscape.

Benefits of Revol LIMS: Improved Productivity - Revol LIMS automates laboratory workflows, reducing manual errors and increasing productivity. Enhanced Data Management - The system provides a centralized platform for data management, ensuring data integrity and compliance with regulatory requirements. Increased Efficiency - Revol LIMS streamlines laboratory operations, reducing turnaround times and improving overall efficiency. Better Decision-Making - The system's advanced reporting and analytics capabilities enable laboratories to make data-driven decisions. Regulatory Compliance - Revol LIMS ensures compliance with regulatory requirements, reducing the risk of non-compliance and associated penalties.

Universal Analysis Software (UAS) is a comprehensive platform that facilitates the analysis and management of forensic genomic data, making intricate bioinformatics tasks easier to navigate. This robust solution encompasses a variety of analysis modules that are compatible with all existing ForenSeq workflows, such as ForenSeq MainstAY, ForenSeq Kintelligence, ForenSeq DNA Signature Prep, ForenSeq mtDNA Whole Genome, and ForenSeq mtDNA Control Region. With UAS, users can swiftly generate FASTQ files, execute alignment processes, and identify forensically significant variants from next-generation sequencing (NGS) data. The software's extensive validation ensures highly dependable variant calls, providing precise outcomes in an accessible format without the burden of per-seat licensing fees. Tailored specifically for forensic analysts, UAS optimizes the management of base-by-base sequence data, offering a wide array of features that support everything from the efficient review of standard STR profiles to in-depth analysis of the most complex samples, thus enhancing the overall efficiency of forensic investigations.

Modern laboratories increasingly depend on electronic systems and digital solutions. An effective laboratory information management system (LIMS) does more than just gather, process, and maintain your data; it enhances operational efficiency. For facilities managing extensive sample datasets, a robust digital solution is essential for maintaining organized and efficient workflows. Sanela Lab Information Management System is designed with advanced healthcare technologies, merging the essential functions of a conventional patient-focused laboratory management system. It prioritizes the management of patient data while facilitating streamlined workflows throughout the laboratory environment, encompassing everything from sample tracking to result dissemination. This software is adaptable, allowing customization to fit the scale of your operation, making it suitable for both single-site and multi-site laboratory configurations. Its versatility ensures that laboratories can effectively respond to diverse operational demands.

As a leading entity in laboratory informatics, ITDOSE Innopath has proficiently created and provided LIMS solutions on a global scale. Our informatics offerings are specifically designed to handle essential data within your organization across various laboratory sites, enhancing productivity and facilitating more effective knowledge sharing. We offer customizable off-the-shelf solutions catering to diverse functional laboratories, including those involved in research, development, quality control, biobanking, and environmental assessment, among others. ITDOSE Innopath is committed to transforming enterprise laboratory informatics by presenting a powerful blend of functionality, adaptability, and technology in a single platform. By assisting organizations in modeling their unique business workflows, we enable seamless integration with both instruments and business applications while ensuring compliance with government regulations, ultimately leading to increased productivity, lower operating costs, and enhanced overall quality. Furthermore, our solutions are continuously evolving to meet the changing needs of the industry, ensuring that our clients remain at the forefront of laboratory informatics advancements.

Streamline your data collection methods by establishing standardized operational procedures. Combine manual lab techniques with automated instruments to enhance efficiency. Facilitate smoother collaborations by providing your partners and service providers with the necessary data to perform their tasks effectively. Boost the consistency of your processes through comprehensive standardization. Assess reproducibility by analyzing multiple iterations of identical operations. Amplify the statistical significance of your experiments by generating additional data points and minimizing errors in experimentation. This heightened statistical power distinguishes robust scientific findings from mere anecdotal evidence. Solid scientific outcomes contribute to stronger patent submissions, more impactful publications, and faster innovation of superior products. Utilize the lab's dashboard to monitor ongoing projects, manage your to-do list, and prioritize outstanding requests, ensuring a well-organized workflow. Ultimately, adopting these strategies will not only enhance productivity but also foster a culture of continuous improvement within the lab environment.

SciCord Solution features are designed to help your company transition quickly into the digital age. SciCord ELN/LIMS can be used to ensure compliance in both manufacturing and laboratory settings. Validated formulas can improve compliance and eliminate errors in calculation. To ensure compliance with SOPs, create lists. Automatic entry verification to flag possible Out-Of-Specification scenarios. Restrictions to prevent the use of expired solutions and ensure that equipment is only used by trained personnel. Intelligent scans alert reviewers to potential issues such as unstable balance, precision, uncalibrated equipment, and unvalidated process. Fully compliant with CFR 21 Part11, including electronic signatures. Custom parsing of attached files extracts data and records it in SciCord experiments for additional calculations and statistical analysis.

Utilize GenomeStudio Software to visualize and analyze data produced on Illumina array platforms, which provides an advanced solution for genotyping microarray data. This robust toolset offers performance-enhanced capabilities and an intuitive graphical interface, allowing for swift and effortless transformation of data into insightful outcomes. You can examine SNP and CNV data through a comprehensive array of 5 million markers and probes, identify sample outliers, and investigate differentially expressed genes among various genomes. Additionally, it facilitates the profiling of miRNA expression and allows you to merge mRNA with microRNA data within a single project. The software also enables the detection of cytosine methylation at single-base resolution and helps in identifying methylation patterns throughout the genome. At Illumina, we are dedicated to leveraging groundbreaking technologies to advance the analysis of genetic variations and functions, paving the way for research that was once beyond reach. Our commitment is to provide innovative, adaptable, and scalable solutions that effectively address our customers' diverse needs. Ultimately, this focus on innovation ensures that we remain at the forefront of genetic research, facilitating discoveries that can transform our understanding of biology.

PacBio (Pacific Biosciences) is a premier life science technology company that is designing, developing and manufacturing advanced sequencing solutions to help scientists and clinical researchers resolve genetically complex problems. Our products address solutions across a broad set of research applications including human germline sequencing, plant and animal sciences, infectious disease and microbiology, oncology, and other emerging applications. The Revio system adds affordability, high throughput, and ease of use to a foundation of long reads, exceptional accuracy, and direct methylation detection. The Onso system is an innovative benchtop short-read DNA sequencing platform with an extraordinary level of accuracy using PacBio sequencing by binding. Software tools for Sequel II/IIe and Revio systems designed to set up and monitor long-read HiFi sequencing runs, review performance metrics, analyze, visualize, and annotate sequencing data.

CloudLIMS.com has been certified by ISO 9001:2015. CloudLIMS.com, a cloud-based Laboratory Information Management System (LIMS), offers strong data security, complimentary support, instrument integration and hosting, as well as data backups. This allows biorepositories, diagnostic testing, and research laboratories to manage data and automate workflows. Our mission is to empower and digitally transform laboratories around the world to improve their quality of life. We created a digital tool called Laboratory Information Management Systems, (LIMS), that manages all information and data flow for clinical and analytical laboratories. We have helped hundreds of analytical testing laboratories to keep food, air and water safe for public consumption.

BIOVIA ONE Lab serves as a robust laboratory informatics platform aimed at optimizing workflows, fostering collaboration, and expediting research efforts in diverse scientific fields. This solution offers a cohesive environment for the management of laboratory data and processes, allowing researchers to make informed decisions more swiftly. It is utilized by organizations in various sectors such as Life Sciences, Consumer Packaged Goods, and Energy & Materials, among others. ONE Lab is adaptable for use in Research, Development, and Quality Assurance/Quality Control, catering to the unique requirements of scientists within each discipline. It effectively oversees samples, experiments, data, inventory, and equipment, as well as workflows, by integrating seamlessly with a variety of laboratory instruments and software. By utilizing a singular data model across all functional areas, ONE Lab eliminates artificial barriers that typically exist between Electronic Lab Notebooks (ELN), Laboratory Information Management Systems (LIMS), Laboratory Execution Systems (LES), and inventory management. This cohesive integration promotes efficiency and enhances the overall productivity of laboratory operations. Ultimately, BIOVIA ONE Lab empowers scientists to focus on innovation and discovery without the hindrances of fragmented systems.

Labosaurus is a laboratory information management system (LIMS) tailored to support small labs lacking a dedicated software development team by offering essential quality assurance and management tools. Among its key features are the management of Employee Records, which includes tracking evaluations and maintaining important documents like resumes, certifications, and training histories. It also facilitates the organization of Standard Operating Procedures (SOPs) by providing a searchable archive for documents and keeping a history of revisions, while notifying staff of any new versions of required SOPs. The Equipment Inventory function allows for detailed records concerning equipment locations, asset numbers, and current statuses, while enabling tracking of verification, preventive maintenance, and servicing activities. Additionally, Labosaurus maintains a comprehensive Reagent Inventory that lists stock chemicals and reagents, ensuring that labs have an accurate understanding of their supplies. This suite of features makes Labosaurus an invaluable tool for smaller laboratories aiming to optimize their operations without extensive software resources.

This complimentary software provides remarkable visual representations of your genomic information, allowing you to examine the specific activities at each base pair within your samples. GenomeBrowse operates as a native application on your desktop, eliminating the need to compromise on speed and quality while enjoying a consistent experience across different platforms. Designed with performance as a priority, it offers a quicker and more seamless browsing experience compared to any other genome browser on the market. Furthermore, GenomeBrowse is seamlessly integrated into the advanced Golden Helix VarSeq platform for variant annotation and interpretation. If you appreciate the visualization capabilities of GenomeBrowse, consider exploring VarSeq for tasks like filtering, annotating, and analyzing your data before leveraging the same interface for visualization. The software is capable of showcasing all your alignment data, and having the ability to view all your samples simultaneously can assist in identifying contextually significant findings. This makes it an invaluable tool for researchers seeking to gain deeper insights from their genomic data.

VarSeq is a user-friendly and efficient software designed for conducting variant analysis on gene panels, exomes, and complete genomes. This comprehensive software solution simplifies tertiary analysis, allowing users to effortlessly automate their workflows and examine variants across various genomic contexts. With VarSeq, the complexities of genomic data become more manageable, enabling researchers to easily navigate and interpret results. The software features a robust filtering and annotation system that helps users efficiently process extensive variant datasets. By employing a sequence of filters, you can swiftly refine your variant list to highlight those of greatest relevance. Once you establish effective parameters for your analysis, VarSeq allows you to save your filter configurations, facilitating the application of the same analytical approach to different datasets. This automated workflow can be consistently utilized across multiple sample batches, making VarSeq particularly suitable for high-throughput settings. Additionally, real-time filtering capabilities empower users to rapidly prototype and adjust analysis workflows according to their specific needs, enhancing the overall research experience. As a result, VarSeq significantly streamlines the variant analysis process for genetic studies.

Cufflinks is a software tool that compiles transcripts, estimates their levels of abundance, and evaluates differential expression and regulation in RNA-Seq datasets. By accepting aligned RNA-Seq reads, it organizes these alignments into a streamlined representation of transcripts. The software then assesses the relative abundances of these transcripts based on the number of supporting reads, while also factoring in potential biases from library preparation methods. Initially created through a collaboration with the Laboratory for Mathematical and Computational Biology, Cufflinks aims to simplify the installation process by offering several binary packages that alleviate the often cumbersome task of building the software from source, which necessitates the installation of various libraries. This toolset encompasses multiple utilities tailored for analyzing RNA-Seq experiments, with some functionalities available independently and others designed to fit into a more comprehensive workflow. Overall, Cufflinks serves as a vital resource for researchers in the field of genomics, enhancing their ability to interpret RNA-Seq data effectively.

CaliberLIMS is a robust laboratory information management tool that will help you make better decisions, work more efficiently, and securely store your data. CaliberLIMS was designed to ensure regulatory compliance. It adheres to the highest standards of integrity and helps you meet all regulatory requirements. The built-in ELN, 20 plug-and-play’ modules, and many other unique features ensure that you have a faster review and more accurate analysis. This will allow for greater productivity and quality. CaliberLIMS will be your laboratory's best friend, enabling digital transformation.

LabPortal is an advanced Veterinary Laboratory Information System (VLIS) that automates critical laboratory tasks for faster turnaround times and reduced errors. This cloud-based solution integrates seamlessly with a variety of analyzers, allowing veterinary laboratories to manage their operations more efficiently. LabPortal features electronic lab notebooks, automated sample tracking, and inventory management to streamline processes and ensure the accuracy of results. Additionally, the system supports invoice and billing management, allowing laboratories to improve both their operational efficiency and profitability. LabPortal is designed to reduce human errors, such as sample mix-ups and contamination, by automating repetitive tasks, enabling veterinary professionals to focus on precise decision-making and patient care.

NVIDIA® Parabricks® stands out as the sole suite of genomic analysis applications that harnesses GPU acceleration to provide rapid and precise genome and exome analysis for various stakeholders, including sequencing centers, clinical teams, genomics researchers, and developers of high-throughput sequencing instruments. This innovative platform offers GPU-optimized versions of commonly utilized tools by computational biologists and bioinformaticians, leading to notably improved runtimes, enhanced workflow scalability, and reduced computing expenses. Spanning from FastQ files to Variant Call Format (VCF), NVIDIA Parabricks significantly boosts performance across diverse hardware setups featuring NVIDIA A100 Tensor Core GPUs. Researchers in genomics can benefit from accelerated processing throughout their entire analysis workflows, which includes stages such as alignment, sorting, and variant calling. With the deployment of additional GPUs, users can observe nearly linear scaling in computational speed when compared to traditional CPU-only systems, achieving acceleration rates of up to 107X. This remarkable efficiency makes NVIDIA Parabricks an essential tool for anyone involved in genomic analysis.

Alissa Interpret serves as a comprehensive genomic data interpretation tool designed for enhancing clinical decision-making. It boosts your efficiency, reduces turnaround times, and ensures adherence to regulatory standards through its versatile CGH and NGS tertiary analysis platform dedicated to variant interpretation and reporting. When combined with Agilent’s top-tier SureSelect NGS reagents, the user-friendly secondary NGS analysis tool Alissa Reporter, Magnis walkaway automation, and TapeStation QC, Alissa Interpret achieves peak operational effectiveness for an efficient NGS data analysis process. Access to both external and internal curated variant knowledgebases is readily available, while the automated variant interpretation system speeds up CGH and NGS tertiary analysis. This single platform accommodates various genomic elements such as SNVs, InDels, CNVs, LOH, and fusions, and seamlessly integrates with your LIMS to eliminate any genomic data analysis delays. Furthermore, it fosters collaboration among peers, enabling the sharing of insights and ultimately enhancing diagnostic accuracy. By leveraging Alissa Interpret, laboratories can not only streamline their workflows but also elevate their overall diagnostic performance.

Created within the Data Sciences Platform at the Broad Institute, this comprehensive toolkit provides an extensive array of features primarily aimed at variant discovery and genotyping. With its robust processing engine and high-performance computing capabilities, it is equipped to manage projects of any magnitude. The GATK has established itself as the industry benchmark for detecting SNPs and indels in both germline DNA and RNA sequencing data. Its functionalities are now broadening to encompass somatic short variant detection as well as addressing copy number variations (CNV) and structural variations (SV). Besides the core variant callers, the GATK incorporates numerous utilities for executing associated tasks, including the processing and quality assurance of high-throughput sequencing data, and it comes bundled with the well-known Picard toolkit. Originally designed for exome and whole genome data generated via Illumina sequencing technology, these tools are versatile enough to be modified for use with various other technologies and study designs. As research evolves, the adaptability of the GATK ensures it remains relevant in diverse genomic investigations.

The DHI-Plus software provides dairy managers with essential insights into herd productivity by identifying cows that require specific attention, such as veterinary care, production levels, somatic cell counts, breeding needs, treatments, and genetic traits. As health data becomes increasingly vital for genomic assessments and ensuring the well-being of livestock, meticulously documenting this information is crucial now more than ever. By leveraging this data to inform strategic decisions, dairy operations can flourish and improve overall efficiency. It is essential to manage treatments effectively to safeguard animal welfare. Additionally, recording health information not only aids in genomic evaluations but also contributes to the long-term enhancement of the herd. Safeguarding your business while adhering to FDA regulations is paramount, and the Drug Tracking Module in the DHI-Plus software is designed to facilitate compliance while promoting herd health and optimizing milk production. With mobile capabilities, treatments can be recorded directly at the cow side, ensuring that all necessary data is captured accurately and efficiently. Keeping thorough records of treatments not only helps in meeting compliance standards but also fosters a healthier, more productive herd overall.

Our Laboratory Information Management Systems (LIMS) are designed to meet your technical, quality, and administrative needs effectively. With our comprehensive services, we can address any specific requirements you may have. Experience exceptional added value at no additional cost. We offer LIMS tailored for physical, chemical, microbiological, environmental, and agronomic testing laboratories. Additionally, our systems are suited for integrated laboratories across various industries, as well as for genetics and molecular biology laboratories. Our solutions also cater specifically to clinical analysis and research laboratories, along with providing specialized software for pathological anatomy. In addition to streamlining analytical management and production, our tools allow you to enhance specific aspects of your laboratory procedures. This can lead to improved quality and efficiency in other operational areas. Our web platform enables easy access to analytics, results, and reports, while our mobile and tablet applications facilitate the management of analytics, data entry, and sample collection. Furthermore, our software adheres to quality management standards in laboratories, ensuring compliance with ISO 17.025 and 9001 procedures for optimal performance and reliability. As a result, you can elevate your laboratory's capabilities and outcomes significantly.

Easy lab management. Streamline communication, consolidate orders, and track inventory. Quartzy is the leading platform for R&D lab productivity. We help you manage the unique workflows of a lab - order, order, inventory, and optimize your resources to ensure your next experiment doesn't get delayed. Quartzy is more than a cloud-native software solution. It's a fully-integrated distributor of lab products, giving scientists and lab managers the ability order more than 10,000,000 products (including consumables and chemicals, office supplies, and more) from over 1,800 top brands. It's as simple as 1-2-3 to simplify your ordering process. In just two clicks, lab members can browse our 10 million-strong catalog or create custom orders for their lab manager. You can manage incoming supply requests and approve them or make an immediate purchase.