Best Medical Accounting Software for Windows of 2025

Find and compare the best Medical Accounting software for Windows in 2025

Use the comparison tool below to compare the top Medical Accounting software for Windows on the market. You can filter results by user reviews, pricing, features, platform, region, support options, integrations, and more.

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    NolaPro Reviews
    NolaPro is an ERP-level accounting, order tracking, inventory, and payroll system developed in Linux that can compete with much more expensive options. It can be customized and scaled to fit any business size, unlike any other accounting program. Cloud version is available for those who prefer a more hands-off approach. However, it can be downloaded locally on Windows and Linux platforms for those who prefer greater control and security. Fulfillment & Service Order Management, AP and AR, CRM, General Ledger. Payroll, Timeclock, B2B Portal (for secure client invoicing payments) and integration to many 3rd-party apps. Or request your own! NolaPro supports multi-currency and offers tons of options & additional features. It also comes fully loaded with more than 150 standard reports. CNet, Entrepreneur Magazine, TechRepublic and The Linux Journal all agree that NolaPro offers flexibility, features, and pricing that provide unmatched value and efficiency in managing your business.
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    QuickBooks Online Reviews
    Top Pick

    QuickBooks Online

    Intuit

    $9/month (normally $15/month)
    45 Ratings
    QuickBooks Online is the most widely used accounting software in the entire world. QuickBooks Online simplifies accounting. Accounting software for small businesses that is #1 makes it easy to track receipts, income, transactions and more. You can take photos of receipts to link them with expenses. Our agents are available to answer any questions you may have about QuickBooks. Keep your business running smoothly by using the apps that you love. QuickBooks Online is compatible with PCs, Macs, tablets and phones. Click the link to get a 30-day free trial, and 50% off for your first three months. QuickBooks is more than just accounting software. QuickBooks helps you keep track of your income and expenses so that you can prepare for taxes. Customers save an average of $3,534 per year. Need more help? QuickBooks Live helps you to stay organized and ready for tax season. QuickBooks Mobile is a mobile application that helps you run your business anywhere, anytime.
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    Microsoft Dynamics 365 Reviews
    Top Pick

    Microsoft Dynamics 365

    Microsoft

    $190 per user per month
    20 Ratings
    Boost the growth of your business with Dynamics 365, a cutting-edge suite of CRM and ERP solutions. Integrate your data seamlessly. Gain insightful predictions. Attain remarkable outcomes. Make informed choices. Implement strategies that propel your business forward. Cultivate and enhance valuable relationships. Elevate both productivity and performance metrics. Access a comprehensive view of your customers. Identify and develop promising leads. Craft cohesive customer interactions. Keep abreast of market shifts. Provide exceptional customer experiences more swiftly. Streamline resources and enhance technician efficiency. Lower operational expenditures. Transform your conventional global financial management practices. Streamline processes for heightened efficiency. Minimize operational costs and simplify financial complexities. Transition from reactive to proactive operations. Modernize and ease your manufacturing and supply chain processes. Extend the longevity of your assets. Integrate your physical and digital sales channels. Foster brand loyalty through meaningful engagement. Surpass customer expectations consistently, ensuring they feel valued and understood.
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    Zoho Books Reviews
    Zoho Books is the best web-based accounting software for small businesses. The platform was designed to help you manage your finances, get you tax ready, automate business workflows, and collaborate across departments. The platform includes many useful features, such as the ability to generate financial reports and knowing your Sales Tax liability. Zoho Books is an online accounting tool that makes it easy to manage your business' accounting. Zoho Books features include invoices and expense tracking, purchase orders, sales and purchase orders, contact management and project time tracking. Organizations can automate repetitive activities such as billing reminders, billing, auto-charge, and thank you notes. Zoho Books allows users to track inventory in real time.
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    QuickBooks Enterprise Reviews
    QuickBooks Enterprise offers a comprehensive solution designed to oversee both your business operations and financial performance. By utilizing QuickBooks Enterprise with cloud access, your team gains the ability to collaborate seamlessly from any location, all while ensuring a secure connection and benefiting from automatic daily backups. Experience enhanced software capabilities and the freedom to work from your preferred location with our hosting options. Furthermore, enjoy a remarkable increase in list capacity—six times that of Pro and Premier—allowing for management of up to 1 million customers, vendors, and inventory entries. Alongside this, you will benefit from expedited payroll processing within QuickBooks and gain valuable insights through over 200 detailed reports, as well as specialized editions tailored to various industries. The Enterprise Diamond package serves as an all-in-one solution that simplifies business management, offering essential features that can be customized and expanded as your business evolves. With our Assisted Payroll feature, we take care of your payroll taxes, ensuring that quarterly and year-end filings are done accurately and punctually, allowing you to focus on growing your business without the worry of payroll complexities. This comprehensive approach guarantees that your business remains efficient and scalable, regardless of its size.
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    Versa Cloud ERP Reviews

    Versa Cloud ERP

    Versa Cloud ERP

    $1800 per year
    1 Rating
    Get the best cloud ERP for fast growing businesses today! Excel spreadsheets and other outdated software are no longer necessary for any business to succeed. Versa Cloud ERP is a new ERP software that eliminates spreadsheets, post-it notes and add-ons. Versa is a modern, all-in-one software designed for inventory heavy manufacturing, distribution and e-commerce businesses that are rapidly growing. It is simpler than the older software used by larger competitors, but it is still powerful enough to be used in businesses like yours. Annual fees start at USD 1,800 per year for all the capabilities of Versa software, including financials, AR/AP manufacturing, inventory warehouse, shipping/receiving logistics, projects CRM, B2B/B2C electronic commerce and more. Winner: 2018 Stevie Gold , 2017 Best in Biz - Silver, 2017-FinancesOnline-Rising Star & Great User Experience , 2018 Software Advice-Front Runners
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    Sage Accounting Reviews
    Sage Accounting is an intelligent cloud accounting platform designed to streamline financial management for small businesses through automation and AI-enhanced tools. Fully compliant with Making Tax Digital regulations, it enables effortless VAT returns, self-assessment, invoicing, and bank reconciliation, helping businesses stay on top of their finances and tax obligations. The platform features Sage Copilot, an AI-powered assistant that automates routine tasks such as payment reminders and VAT submissions while delivering actionable insights on cash flow and profitability. Users can upload receipts and invoices, which the AI processes by extracting key data, flagging duplicates, and reducing manual entry errors. Sage Accounting offers flexible plans—from Start for basic accounting needs, to Standard and Plus for businesses requiring payroll, inventory management, and multi-currency support. Customers receive 3 months free initially and benefit from unlimited invoice creation, customizable reports, and integrated payroll options. Sage also provides extensive learning resources, community support, and expert guidance to help businesses grow confidently. With a user-friendly interface and scalable features, Sage Accounting makes managing finances easier, faster, and more accurate.
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    GnuCash Reviews
    GnuCash is designed to be user-friendly while also being robust and adaptable, enabling users to manage their bank accounts, investments, and financial activities like income and expenditures. With an interface as simple and straightforward as a checkbook register, it adheres to professional accounting standards, guaranteeing accurate reporting and balanced financial records. The entire project relies on the efforts of dedicated volunteers for its development, maintenance, documentation, and translation. We encourage your participation in helping to translate GnuCash into your language through Weblate. Each transaction in the system requires that one account is debited and another credited for the same amount, ensuring that the financial records remain balanced, where the total of income minus expenses equals the total of assets minus liabilities. Furthermore, GnuCash's checkbook-style register offers a tailored, convenient, and familiar way to input financial transactions, making the process even more accessible. Your contributions can help enhance this valuable tool for users worldwide.
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    Accounting Xpert Reviews

    Accounting Xpert

    Micronetics

    $1495.00/one-time/user
    The Client Write-up feature of the Accounting Xpert Enterprise Edition sets a benchmark for write-up software in today's market. Designed to be user-friendly, quick, and effective, it is well-supported by thorough documentation and online tutorials. This comprehensive integrated system includes modules for Write-up, Bank Reconciliation, ATF Payroll, and W2/1099 Laser processing, making it suitable for a wide array of clients and adaptable to practices of all sizes. Xpert's Client Write-up software not only delivers standard capabilities but also offers numerous advanced functionalities, such as the elimination of monthly closings, the ability to edit transactions at any point with complete audit tracking, and the option to re-run reports for any date range, encompassing multiple years. Additionally, users can print reports as PDF files, automatically send them via email or fax, and integrate seamlessly with external software like Microsoft Word for compilation letters and Excel for data visualization. The software also supports data export to tax applications and importing from external programs, including QuickBooks, making it an incredibly versatile tool for accounting professionals. Overall, Xpert’s extensive feature set ensures that it meets the diverse demands of modern accounting practices.
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    AccountEdge Reviews

    AccountEdge

    Priority Software US

    $20/month
    AccountEdge for Mac and Windows is a powerful accounting software that's easy to use. Invoicing Create and send customer invoices for products, services, or time and track payment status on open sales. Expenses  Managing purchases and expenses helps you track your inventory and overhead costs. AccountEdge enables you to manage your vendors, payments, and recurring transactions.  Banking  Banking helps you manage money in and out in as much detail as you want. With integrated bank feeds and auto-match, reconciling your accounts is a breeze.  Payroll Your employees are your most important asset, and maintaining compliance by tracking their pay, accruals, and expenses is critical to your business. With our optional payroll service, you'll always be on the latest payroll tax tables for accurate processing.  Inventory Inventory tracking helps you manage your items and services and track their stock by location to ensure you have enough products on hand or on order to help fulfill customer requirements.    Accounting  Your chart of accounts is at the core of your financial reporting. Maintain your general ledger and budgets, create financial reports to help you monitor your business, and make informed decisions. 
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    NiftyISO Reviews

    NiftyISO

    Niftysol

    $9 per month
    NiftyISO 9001 Audit software simplifies the process of quality management by guaranteeing compliance, boosting efficiency, and maintaining consistency throughout your organization. Available on various platforms, including the web, mobile devices, and tablets, it enables you to enhance quality from any location, thereby improving operations regardless of whether you are working in the office or remotely. This versatility allows teams to stay aligned and focused on quality objectives, leading to better overall results.
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    MoneyWorks Reviews

    MoneyWorks

    Cognito Software

    $249 per user
    MoneyWorks® by Cognito Software offers a perfect blend of simplicity and essential features, coupled with the robust power and adaptability you require. This software provides you with the advantages typically found in large enterprises at an affordable cost suited for small businesses. With over 40,000 companies globally utilizing its services, you can experience a seamless, user-friendly interface along with the extensive capabilities usually reserved for larger corporations, all while being mindful of your budget. If your current software feels restrictive or cumbersome, you will appreciate the dynamic features MoneyWorks has to offer. Additionally, its affordability and straightforward implementation process may exceed your expectations. Many of our users consistently report that MoneyWorks stood out in their assessments of available options. Discover how our clientele transitioned from settling for less to enhancing their accounting practices. Furthermore, MoneyWorks boasts versatile and effective data importing options, allowing you to easily integrate information from various sources, whether through text files or simply copying and pasting from spreadsheets. Transitioning to a more efficient accounting solution has never been easier.
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    AccuFund Reviews
    AccuFund provides a dependable accounting suite tailored for nonprofit entities and governmental bodies aiming to improve their financial management practices. With options for both on-site and cloud-based deployment, AccuFund's accounting solution for nonprofits enhances data transparency and facilitates departmental access, while ensuring efficient and precise financial reporting. Additionally, the platform includes optional modules, allowing organizations to personalize their accounting systems to better meet their needs. Furthermore, users benefit from the expertise of seasoned consultants who assist in optimizing their investment in the software. This comprehensive support helps organizations navigate the complexities of financial management more effectively.
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    Multiview ERP Reviews
    Our vision is to End Month End. For nearly 30 years, Multiview has been proudly advancing corporate finance and back-office operations alongside our clients so they can spend more time focusing on their business. Corporate Finance and accounting have been leveraged as a way to discuss past performance. There is value in that. We believe, however, there is even more value if you can leverage that information not only monthly, quarterly, or annually, but daily to drive results and decisions with the information. Not talk about the results after it is too late to do something about it. The power of data control is at the hands of the CFO or centralized in an organization is you can share it throughout the company. Trusting the information you’re making decisions on is incredibly important. Ultimately, the finance team’s job is to tell stories. Tell the stories about what is actually going on within an organization, and support the story with accurate, timely data. Join us on our vision to End Month End, and help your organization Stop Chasing Numbers. Start Using them.
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    CheckMark MultiLedger Reviews

    CheckMark MultiLedger

    CheckMark

    $499.00/one-time
    Effective accounting is essential for the success of any enterprise. CheckMark offers the MultiLedger integrated accounting system to streamline this process for you. Our software is user-friendly, and you don't have to be a CPA to fully utilize its capabilities. Among the numerous features included in MultiLedger are General Ledger, Accounts Receivable, Accounts Payable, Inventory management, and Job tracking. This robust software supports multiple users and operates seamlessly on both Mac and Windows platforms. Tailored specifically for small to medium-sized businesses, MultiLedger empowers users to generate and dispatch invoices, reconcile bank transactions, manage inventory, oversee cash flow, create important financial reports, and easily print Forms 1099. Packed with a comprehensive suite of tools, MultiLedger ensures that your small business operates smoothly and efficiently. It’s time to elevate your business operations beyond the basics and unlock its full potential.
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    Book Keeper Reviews

    Book Keeper

    Just Apps

    $4 per month
    Book Keeper is designed for simplicity, making it accessible for anyone without prior accounting experience. Users can effortlessly create orders and invoices, as well as track purchases and expenses. It offers complete inventory management, allowing the generation of barcodes and effective warehouse oversight, including the maintenance of bills of materials, batch details, expiry dates, and serial numbers. Data synchronization is seamless through your personal Dropbox account, ensuring that you always have control over your information. Multiple users can be created with specific role-based access, enhancing collaboration. The platform provides detailed insights into your business through a variety of financial reports, exceeding 30 different types to evaluate every facet of performance. Regardless of your location, you can stay updated on your business's status. With the Book Keeper mobile application, you have the flexibility to capture expenses, issue invoices, and generate receipts while in the field, and once you're back at the office, you can access all your data on your Windows PC or laptop without any hassle. This comprehensive approach makes managing finances straightforward and efficient for all users.
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    GMS Accounting Software Reviews
    The GMS Accounting and Financial Management Reporting System is distinct from conventional commercial accounting or government fund accounting solutions tailored for nonprofit organizations. It has been meticulously developed to cater to the unique needs of accounting for contracts, grants, and program activities specific to nonprofit and public entities. Additionally, the GMS Revolving Loan Servicing Software stands out as a powerful and all-encompassing system that offers one of the most effective portfolio management tools available. Capable of managing virtually any loan program, it addresses both the daily operational requirements of portfolio management and extensive reporting features. Our software ensures that reporting aligns with all applicable state and federal regulations, meets audit standards, and fulfills the documentation needs of the Board of Directors and the management team, thus enhancing organizational transparency and accountability. This makes it an invaluable asset for organizations looking to streamline their financial processes.
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    ActivityHD Reviews
    Established in 1977, AccountingWare is a software development company dedicated to the accounting sector. We have consistently adapted to the evolving IT frameworks, shifts in accounting regulations, and the growing demands of governmental reporting, ensuring we deliver dependable software and exceptional support tailored to our clients’ requirements. Our flagship product, ActivityHD, serves as a versatile and all-encompassing ERP solution that enables advanced accounting departments to efficiently oversee their operations. This comprehensive system includes modules such as ActivGL, ActivAP, ActivPO, ActivAR, ActivBR, ActivPR, and ActivFA, which work together to enhance overall productivity and streamline processes. Through innovation and unwavering client focus, we strive to empower businesses in managing their financial intricacies with ease.
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    Prophix Reviews

    Prophix

    Prophix Software

    Prophix is a comprehensive software solution for corporate performance management (CPM) designed to meet the needs of businesses across various sizes and sectors. By integrating budgeting, planning, forecasting, financial consolidation, and reporting functionalities into a single platform, Prophix enables organizations to transition from traditional Excel methods and enhance their overall performance. Offered both on-premises and in the cloud, it has gained the trust of thousands of businesses globally, allowing them to streamline and automate essential financial operations effectively. This robust software empowers companies to make informed decisions and drive strategic growth.
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    SapphireOne Reviews
    SapphireOne is an all-encompassing solution for ERP, CRM, and financial accounting tailored for businesses ranging from small to medium-sized operations as well as larger enterprises. This flexible and robust platform features eight distinct modules designed to revolutionize business operations, significantly improving efficiency and effectiveness. Among SapphireOne's impressive array of modules are accounting, inventory management, job projects, asset tracking, payroll processing, management tools, utilities, and a workbook feature. Additionally, SapphireOne is committed to continuously evolving to meet the dynamic needs of its users.
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    Unit4 Financial Planning & Analysis Reviews
    Our innovative tools for financial planning and analysis cater to individuals who prefer simplicity while navigating complexity. We empower your teams to not only grasp the metrics but also to disseminate and leverage that knowledge for improved outcomes. With Unit4 Financial Planning & Analysis, your organization can swiftly and easily identify what truly matters and utilize that understanding to transform plans and concepts into actionable steps. Our cloud-based FP&A software offers efficient methods for your team to effectively harness financial data through enhanced performance management, comprehensive planning, budgeting, forecasting, financial consolidation, as well as advanced reporting, visualization, and analytics. By adopting a flexible and integrated methodology, we address all aspects of your organization's financial planning requirements, whether it's managing cash flow, overseeing operational budgets, or predicting sales, expenditures, and revenues. This holistic approach ensures that your organization remains agile and responsive in a rapidly changing financial landscape.
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    SAP S/4HANA Reviews
    SAP S/4HANA is an advanced ERP solution tailored for modern enterprises, integrating artificial intelligence and machine learning for enhanced functionality. This cutting-edge system can be deployed on-premises, in public or private cloud settings, or through a hybrid model. With its future-oriented approach, SAP S/4HANA incorporates intelligent technologies such as AI, machine learning, and sophisticated analytics, enabling the transformation of business operations via intelligent automation. Powered by SAP HANA, a leading in-memory database, it delivers remarkable real-time processing capabilities alongside a streamlined data architecture. Users can select from a diverse array of capabilities within SAP S/4HANA, utilizing the latest technologies and automation to revolutionize their operational processes. These capabilities encompass various business functions, including finance, supply chain, manufacturing, sales, and distribution, ensuring comprehensive support for organizations. By leveraging SAP S/4HANA, businesses can enhance their agility and responsiveness in an ever-evolving market landscape.
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    Denali Business Reviews

    Denali Business

    Cougar Mountain Software

    Denali Business offers integrated bookkeeping and accounting solutions designed to maintain the financial integrity of small businesses. This all-encompassing accounting system caters to small to mid-sized enterprises, facilitating smooth bookkeeping and accounting processes through sophisticated features for accounting and reporting. Its intuitive and user-friendly interface ensures easy navigation, making it accessible for all users. With a robust audit trail, your financial data remains secure and resistant to tampering. The flexible nature of the solution allows for the addition or removal of modules as your business evolves, ensuring you can adapt swiftly to changes. Outstanding customer support addresses the unique challenges faced by your business. You can create unlimited user accounts, unlocking endless potential for growth. Ultimately, this powerful accounting solution not only keeps your financial records organized but also empowers you to make informed decisions through comprehensive financial analytics, enhancing your business strategy.
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    True Sky Reviews
    True Sky empowers you to take charge of your budgeting, planning, and forecasting activities. With robust data tools and a user-friendly Excel interface, the time usually spent on creating templates, entering data, merging information, and conducting reviews is significantly minimized, allowing you to dedicate more effort to analysis and strategic planning. Enhance your current workflows through a highly adaptable and configurable system that enables real-time data access and seamless integration with external platforms. Effortlessly create and implement reports tailored to the specific needs of end users, ensuring that you extract every ounce of actionable insight through comprehensive and organized analytics. This shift allows you to invest more time in analysis and strategy rather than in budget management. Additionally, features such as notes, comments, and audit trails provide valuable context behind the numbers. The system also offers intuitive and customizable input methods that cater to all users, irrespective of their backgrounds or expertise in budgeting and finance, ensuring a smoother experience for everyone involved in the process. This level of functionality not only enhances productivity but also fosters informed decision-making within your organization.
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    MIP Cloud Reviews

    MIP Cloud

    Momentive Software

    MIP Cloud by Momentive Software provides a comprehensive cloud-based fund accounting platform tailored for nonprofits and government entities. It combines innovative technology with a scalable design to meet evolving organizational needs while enabling users to track unlimited funds with ease. The system offers real-time, sophisticated reporting tools and customizable modules that streamline financial management. By moving accounting to the cloud, MIP eliminates the need for costly servers and manual maintenance, allowing IT teams to focus on other priorities. Security and compliance are ensured through encrypted communications, limited user access, and certifications such as SOC, SSAE, and AICPA endorsements. The platform supports seamless migration, with a simple process that securely transfers data and grants users immediate access. MIP Cloud also integrates with mission-critical systems to provide a cohesive accounting experience. Trusted by many organizations, it empowers users to manage financial complexities efficiently while advancing their mission goals.
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