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Average Ratings 1 Rating
Description
Loupe Browser stands out as a robust visualization tool, offering the user-friendly capabilities essential for delving into and interpreting 10x Genomics Chromium and Visium datasets. Additionally, the LoupeR package facilitates the transformation of Seurat objects into files compatible with Loupe Browser. The interactive features of the Loupe Browser interface are exemplified through its use of a lung squamous cell carcinoma dataset. Central to the user experience is the view panel, where individual points, each representing cell barcodes, are displayed across multiple projections. Each point typically corresponds to a single cell’s barcode, enabling focused analysis. The t-SNE plot generated by the cell ranger pipeline serves as the default projection, while alternative visualization options are also accessible. Users can effortlessly reposition the plot by dragging the mouse over the cells and can zoom in or out using the mouse wheel or trackpad. Moreover, as the mouse hovers over the plot, cluster labels become visible, which proves particularly beneficial when working with datasets that contain numerous precomputed clusters. This capability enhances the analytical experience, making it easier to identify and interpret complex data patterns.
Description
Pop!_OS serves as an operating system tailored for professionals in STEM and creative fields who rely on their computers as essential tools for exploration and innovation. Experience the freedom of secure and dependable open-source software that aligns with your inquisitive nature. Pop!_OS is crafted for swift navigation, streamlined workspace management, and a smooth, efficient workflow, ensuring that your system fosters exploration rather than hinders it. Whether you prefer taking your time with intuitive dock and touchpad gestures or speeding through tasks with a responsive keyboard, the system adapts to your style. With numerous options for both mouse and keyboard customizations, you can maneuver your workflow in a manner that suits you best. The OS employs auto-tiling to alleviate the burden of organizing your workspace, much like hiring an assistant to tackle tedious tasks. While you could manually adjust your windows, Pop!_OS optimizes this process so you can focus on what truly matters—your creative and analytical pursuits. Ultimately, this operating system invites you to embrace a more productive and enjoyable computing experience.
API Access
Has API
No
API Access
Has API
No
Integrations
Android Studio
No
Blender
No
Bowtie
No
Caffe
No
Chromium
No
DaVinci Resolve
No
Discord
No
Dropbox
No
Inkscape
No
Jupyter Notebook
No
Integrations
Android Studio
Yes
Blender
Yes
Bowtie
Yes
Caffe
Yes
Chromium
Yes
DaVinci Resolve
Yes
Discord
Yes
Dropbox
Yes
Inkscape
Yes
Jupyter Notebook
Yes
Pricing Details
No price information available.
Free Trial
No
Free Version
No
Pricing Details
No price information available.
Free Trial
No
Free Version
No
Deployment
Web-Based
No
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
Yes
Mac
Yes
Linux
Yes
Chromebook
No
Deployment
Web-Based
No
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
No
Mac
No
Linux
Yes
Chromebook
No
Customer Support
Business Hours
Yes
Live Rep (24/7)
No
Online Support
Yes
Customer Support
Business Hours
Yes
Live Rep (24/7)
Yes
Online Support
Yes
Types of Training
Training Docs
Yes
Webinars
No
Live Training (Online)
No
In Person
Yes
Types of Training
Training Docs
Yes
Webinars
No
Live Training (Online)
No
In Person
Yes
Vendor Details
Company Name
10x Genomics
Founded
2012
Country
United States
Website
www.10xgenomics.com/support/software/loupe-browser/latest
Vendor Details
Company Name
System76
Founded
2008
Country
United States
Website
pop.system76.com