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Description
Created within the Data Sciences Platform at the Broad Institute, this comprehensive toolkit provides an extensive array of features primarily aimed at variant discovery and genotyping. With its robust processing engine and high-performance computing capabilities, it is equipped to manage projects of any magnitude. The GATK has established itself as the industry benchmark for detecting SNPs and indels in both germline DNA and RNA sequencing data. Its functionalities are now broadening to encompass somatic short variant detection as well as addressing copy number variations (CNV) and structural variations (SV). Besides the core variant callers, the GATK incorporates numerous utilities for executing associated tasks, including the processing and quality assurance of high-throughput sequencing data, and it comes bundled with the well-known Picard toolkit. Originally designed for exome and whole genome data generated via Illumina sequencing technology, these tools are versatile enough to be modified for use with various other technologies and study designs. As research evolves, the adaptability of the GATK ensures it remains relevant in diverse genomic investigations.
Description
Gain valuable insights into your company's operations without the burden of a complicated project. Regardless of the number of systems and data sources involved in your processes, our collaboration with Denodo and data virtualization allows us to track everything seamlessly from beginning to end. With our adaptable APIs and connectors, you can quickly set up and start working. The intuitive interface, along with pre-built filters and an easy-to-master query language, enables you to concentrate on the essential aspects: the processes rather than the tools themselves. Uncover the dynamics of your processes by beginning with the most frequently executed tasks and gradually broadening your perspective to include all variations. You can select the number of variants to aggregate and display frequency and duration metrics, providing you with unparalleled insights into the true performance of your process model. In a matter of moments, the contextual information panel will help you pinpoint outliers and extreme variants, allowing you to delve deeper into the hidden intricacies of your organization. This newfound knowledge can empower you to make informed decisions and drive improvements across your operations.
API Access
Has API
No
API Access
Has API
Yes
Pricing Details
Free
Free Trial
No
Free Version
Yes
Pricing Details
€500 per month
Free Trial
No
Free Version
No
Deployment
Web-Based
Yes
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
Yes
Mac
Yes
Linux
Yes
Chromebook
No
Deployment
Web-Based
Yes
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
No
Mac
No
Linux
No
Chromebook
No
Customer Support
Business Hours
No
Live Rep (24/7)
No
Online Support
Yes
Customer Support
Business Hours
No
Live Rep (24/7)
No
Online Support
Yes
Types of Training
Training Docs
Yes
Webinars
Yes
Live Training (Online)
No
In Person
No
Types of Training
Training Docs
Yes
Webinars
No
Live Training (Online)
Yes
In Person
No
Vendor Details
Company Name
Broad Institute
Country
United States
Website
gatk.broadinstitute.org/hc/
Vendor Details
Company Name
Inverbis
Founded
2020
Country
Spain
Website
web.inverbisanalytics.com