Average Ratings 0 Ratings
Average Ratings 0 Ratings
Description
BrainWave 6 is a powerful and adaptable electrophysiology application engineered for the recording, playback, and analysis of data gathered from both single- and multi-well high-density microelectrode arrays (HD-MEAs), offering a comprehensive suite of tools that facilitate the transition from data acquisition to insightful analysis through optimized automation and advanced analytical features. The software enables real-time visualization of HD-MEA data for up to 24 wells, granting users complete oversight of experimental configurations and timing while allowing for easy navigation through recordings, the ability to review raw or processed data, and the option to annotate events directly within the interface. With an extensive range of metrics available for assessing neuronal and cardiac activity, BrainWave 6 includes area-based intra-well segmentation for the analysis of multi-spheroids and organoids, alongside AI-boosted spike detection capabilities. Designed to scale for high-throughput applications, it is fully compatible with all 3Brain systems and can be integrated with robotic automation through HyperCAM Delta. Furthermore, additional modules are available that support automated long-term potentiation protocols, complete with real-time feedback, enhancing the overall research workflow and productivity. This ensures that researchers have access to cutting-edge tools that can adapt to their specific experimental needs.
Description
Created within the Data Sciences Platform at the Broad Institute, this comprehensive toolkit provides an extensive array of features primarily aimed at variant discovery and genotyping. With its robust processing engine and high-performance computing capabilities, it is equipped to manage projects of any magnitude. The GATK has established itself as the industry benchmark for detecting SNPs and indels in both germline DNA and RNA sequencing data. Its functionalities are now broadening to encompass somatic short variant detection as well as addressing copy number variations (CNV) and structural variations (SV). Besides the core variant callers, the GATK incorporates numerous utilities for executing associated tasks, including the processing and quality assurance of high-throughput sequencing data, and it comes bundled with the well-known Picard toolkit. Originally designed for exome and whole genome data generated via Illumina sequencing technology, these tools are versatile enough to be modified for use with various other technologies and study designs. As research evolves, the adaptability of the GATK ensures it remains relevant in diverse genomic investigations.
API Access
Has API
No
API Access
Has API
No
Integrations
Adobe Acrobat Reader
Yes
Docker
No
MATLAB
Yes
Python
Yes
h5py
Yes
Integrations
Adobe Acrobat Reader
No
Docker
Yes
MATLAB
No
Python
No
h5py
No
Pricing Details
No price information available.
Free Trial
No
Free Version
No
Pricing Details
Free
Free Trial
No
Free Version
Yes
Deployment
Web-Based
No
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
Yes
Mac
No
Linux
No
Chromebook
No
Deployment
Web-Based
Yes
On-Premises
No
iPhone App
No
iPad App
No
Android App
No
Windows
Yes
Mac
Yes
Linux
Yes
Chromebook
No
Customer Support
Business Hours
Yes
Live Rep (24/7)
No
Online Support
Yes
Customer Support
Business Hours
No
Live Rep (24/7)
No
Online Support
Yes
Types of Training
Training Docs
Yes
Webinars
No
Live Training (Online)
No
In Person
No
Types of Training
Training Docs
Yes
Webinars
Yes
Live Training (Online)
No
In Person
No
Vendor Details
Company Name
3Brain AG
Founded
2004
Country
Switzerland
Website
www.3brain.com/products/software/brainwave-6
Vendor Details
Company Name
Broad Institute
Country
United States
Website
gatk.broadinstitute.org/hc/