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features
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Description

BrainWave 6 is a powerful and adaptable electrophysiology application engineered for the recording, playback, and analysis of data gathered from both single- and multi-well high-density microelectrode arrays (HD-MEAs), offering a comprehensive suite of tools that facilitate the transition from data acquisition to insightful analysis through optimized automation and advanced analytical features. The software enables real-time visualization of HD-MEA data for up to 24 wells, granting users complete oversight of experimental configurations and timing while allowing for easy navigation through recordings, the ability to review raw or processed data, and the option to annotate events directly within the interface. With an extensive range of metrics available for assessing neuronal and cardiac activity, BrainWave 6 includes area-based intra-well segmentation for the analysis of multi-spheroids and organoids, alongside AI-boosted spike detection capabilities. Designed to scale for high-throughput applications, it is fully compatible with all 3Brain systems and can be integrated with robotic automation through HyperCAM Delta. Furthermore, additional modules are available that support automated long-term potentiation protocols, complete with real-time feedback, enhancing the overall research workflow and productivity. This ensures that researchers have access to cutting-edge tools that can adapt to their specific experimental needs.

Description

Created within the Data Sciences Platform at the Broad Institute, this comprehensive toolkit provides an extensive array of features primarily aimed at variant discovery and genotyping. With its robust processing engine and high-performance computing capabilities, it is equipped to manage projects of any magnitude. The GATK has established itself as the industry benchmark for detecting SNPs and indels in both germline DNA and RNA sequencing data. Its functionalities are now broadening to encompass somatic short variant detection as well as addressing copy number variations (CNV) and structural variations (SV). Besides the core variant callers, the GATK incorporates numerous utilities for executing associated tasks, including the processing and quality assurance of high-throughput sequencing data, and it comes bundled with the well-known Picard toolkit. Originally designed for exome and whole genome data generated via Illumina sequencing technology, these tools are versatile enough to be modified for use with various other technologies and study designs. As research evolves, the adaptability of the GATK ensures it remains relevant in diverse genomic investigations.

API Access

Has API No 

API Access

Has API No 

Screenshots View All

Screenshots View All

Integrations

Adobe Acrobat Reader Yes 
Docker No 
MATLAB Yes 
Python Yes 
h5py Yes 

Integrations

Adobe Acrobat Reader No 
Docker Yes 
MATLAB No 
Python No 
h5py No 

Pricing Details

No price information available.
Free Trial No 
Free Version No 

Pricing Details

Free
Free Trial No 
Free Version Yes 

Deployment

Web-Based No 
On-Premises No 
iPhone App No 
iPad App No 
Android App No 
Windows Yes 
Mac No 
Linux No 
Chromebook No 

Deployment

Web-Based Yes 
On-Premises No 
iPhone App No 
iPad App No 
Android App No 
Windows Yes 
Mac Yes 
Linux Yes 
Chromebook No 

Customer Support

Business Hours Yes 
Live Rep (24/7) No 
Online Support Yes 

Customer Support

Business Hours No 
Live Rep (24/7) No 
Online Support Yes 

Types of Training

Training Docs Yes 
Webinars No 
Live Training (Online) No 
In Person No 

Types of Training

Training Docs Yes 
Webinars Yes 
Live Training (Online) No 
In Person No 

Vendor Details

Company Name

3Brain AG

Founded

2004

Country

Switzerland

Website

www.3brain.com/products/software/brainwave-6

Vendor Details

Company Name

Broad Institute

Country

United States

Website

gatk.broadinstitute.org/hc/

Product Features

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